CCT: a coordinate conversion tool for hepatitis B virus

Southern African Journal of Infectious Diseases

 
 
Field Value
 
Title CCT: a coordinate conversion tool for hepatitis B virus
 
Creator Bell, Trevor Graham Yousif, Mukhlid Kramvis, Anna
 
Subject — bioinformatics; genotypes; HBV; hepatitis B virus
Description The hepatitis B virus (HBV) genome has ∼3 200 nucleotides, coding for seven proteins in four overlapping open reading frames (ORFs). Comparison of genomic coordinates between different samples and/or published literature requires manual conversion. An online tool is presented to convert nucleotide or amino acid positions between ORFs, regions and domains of the HBV genome. The user enters a position into an interactive web page, which then shows this position in all other applicable ORFs, regions or domains and plots it on a diagrammatic representation of the HBV genome. This tool assists researchers to convert coordinates, thereby facilitating comparisons between samples.
 
Publisher AOSIS Publishing
 
Contributor
Date 2019-01-07
 
Type info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion — —
Format application/pdf
Identifier 10.4102/sajid.v34i1.153
 
Source Southern African Journal of Infectious Diseases; Vol 34, No 1 (2019); 4 pages 2313-1810 2312-0053
 
Language eng
 
Relation
The following web links (URLs) may trigger a file download or direct you to an alternative webpage to gain access to a publication file format of the published article:

https://sajid.co.za/index.php/sajid/article/view/153/108
 
Coverage — — —
Rights Copyright (c) 2019 Trevor Graham Bell, Mukhlid Yousif, Anna Kramvis https://creativecommons.org/licenses/by/4.0
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